Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 AL603832.2-201ENST00000566195 2125 ntBASIC16.33■□□□□ 0.2
RNF135Q8IUD6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 ACKR1-201ENST00000368121 1240 ntBASIC16.32■□□□□ 0.2
RNF135Q8IUD6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 FAM197Y7-201ENST00000432892 766 ntBASIC16.32■□□□□ 0.2
RNF135Q8IUD6 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 AL691432.1-201ENST00000596308 1422 ntBASIC16.32■□□□□ 0.2
RNF135Q8IUD6 NDUFV2P1-201ENST00000596415 907 ntBASIC16.32■□□□□ 0.2
RNF135Q8IUD6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 AC097724.1-201ENST00000609581 426 ntBASIC16.32■□□□□ 0.2
RNF135Q8IUD6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.32■□□□□ 0.2
RNF135Q8IUD6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 AC138951.2-201ENST00000623455 1161 ntBASIC16.32■□□□□ 0.2
RNF135Q8IUD6 AC092978.1-202ENST00000637590 1327 ntBASIC16.32■□□□□ 0.2
RNF135Q8IUD6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF135Q8IUD6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 BNIP3P1-202ENST00000550043 1585 ntBASIC16.31■□□□□ 0.2
RNF135Q8IUD6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 AC004987.2-201ENST00000395959 1148 ntBASIC16.31■□□□□ 0.2
RNF135Q8IUD6 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.31■□□□□ 0.2
RNF135Q8IUD6 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 LINC00554-201ENST00000564841 3011 ntBASIC16.31■□□□□ 0.2
RNF135Q8IUD6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF135Q8IUD6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms