Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 VDAC1P7-201ENST00000462417 847 ntBASIC13.92□□□□□ -0.18
ATG4DQ86TL0 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 AC055876.2-201ENST00000531834 546 ntBASIC13.92□□□□□ -0.18
ATG4DQ86TL0 AL596325.1-201ENST00000563991 1082 ntBASIC13.92□□□□□ -0.18
ATG4DQ86TL0 WASH4P-201ENST00000564273 1246 ntBASIC13.92□□□□□ -0.18
ATG4DQ86TL0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 CHCHD2P3-201ENST00000603038 451 ntBASIC13.92□□□□□ -0.18
ATG4DQ86TL0 AC099568.2-201ENST00000609194 695 ntBASIC13.92□□□□□ -0.18
ATG4DQ86TL0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 AL360270.3-201ENST00000609118 1348 ntBASIC13.91□□□□□ -0.18
ATG4DQ86TL0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 AL353779.1-201ENST00000434793 351 ntBASIC13.91□□□□□ -0.18
ATG4DQ86TL0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 RPL13AP25-201ENST00000484130 612 ntBASIC13.91□□□□□ -0.18
ATG4DQ86TL0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 BRI3BPP1-201ENST00000594224 787 ntBASIC13.91□□□□□ -0.18
ATG4DQ86TL0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 AC106881.1-201ENST00000605849 3329 ntBASIC13.91□□□□□ -0.18
ATG4DQ86TL0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 AL138799.1-201ENST00000448213 1675 ntBASIC13.91□□□□□ -0.18
ATG4DQ86TL0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATG4DQ86TL0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms