Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM3BQ7LBC6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM3BQ7LBC6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM3BQ7LBC6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM3BQ7LBC6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.12■□□□□ 0.65
KDM3BQ7LBC6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM3BQ7LBC6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM3BQ7LBC6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM3BQ7LBC6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM3BQ7LBC6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
KDM3BQ7LBC6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.12■□□□□ 0.65
KDM3BQ7LBC6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.12■□□□□ 0.65
KDM3BQ7LBC6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM3BQ7LBC6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 AC116345.2-201ENST00000512837 523 ntBASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 AL157813.1-201ENST00000612996 587 ntBASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 PAUPAR-201ENST00000630360 2965 ntBASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 AC018629.1-201ENST00000623381 1736 ntBASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 AC126177.1-201ENST00000547829 2218 ntBASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 KRTAP19-9P-201ENST00000421795 191 ntBASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 RN7SL11P-201ENST00000471305 293 ntBASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 AC008825.2-201ENST00000603374 718 ntBASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 MEG3_2.1-201ENST00000611456 105 ntBASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 MIR6720-201ENST00000611664 98 ntBASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM3BQ7LBC6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 OR2R1P-201ENST00000441404 914 ntBASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 NUP210P1-202ENST00000504322 710 ntBASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 AC005740.2-201ENST00000511085 419 ntBASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 TUBBP5-203ENST00000508529 1334 ntBASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 CICP23-201ENST00000605013 2741 ntBASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDM3BQ7LBC6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 FAM58BP-201ENST00000439056 645 ntBASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
KDM3BQ7LBC6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms