Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 TMEM14DP-201ENST00000422205 345 ntBASIC16.15■□□□□ 0.18
RNF43Q68DV7 AL442647.2-201ENST00000429864 857 ntBASIC16.15■□□□□ 0.18
RNF43Q68DV7 AC007389.4-201ENST00000454674 793 ntBASIC16.15■□□□□ 0.18
RNF43Q68DV7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 MIR4538-201ENST00000581377 78 ntBASIC16.15■□□□□ 0.18
RNF43Q68DV7 RN7SL219P-201ENST00000582872 296 ntBASIC16.15■□□□□ 0.18
RNF43Q68DV7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 RPSAP52-203ENST00000622976 1023 ntBASIC16.15■□□□□ 0.18
RNF43Q68DV7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 CICP4-201ENST00000447359 2812 ntBASIC16.15■□□□□ 0.18
RNF43Q68DV7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF43Q68DV7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RNF43Q68DV7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RNF43Q68DV7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
RNF43Q68DV7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
RNF43Q68DV7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 AL390755.1-201ENST00000623716 2027 ntBASIC16.14■□□□□ 0.17
RNF43Q68DV7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 WFDC1-204ENST00000613603 549 ntBASIC16.14■□□□□ 0.17
RNF43Q68DV7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 AC104581.4-201ENST00000623126 3052 ntBASIC16.14■□□□□ 0.17
RNF43Q68DV7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF43Q68DV7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms