Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 LINC01101-201ENST00000622953 1884 ntBASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 AC005034.1-201ENST00000426657 489 ntBASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 AC120045.2-201ENST00000567334 178 ntBASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TTC39BQ5VTQ0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.02■□□□□ 0.15
TTC39BQ5VTQ0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 KRT8P44-201ENST00000441609 1350 ntBASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 RPL5P21-201ENST00000404620 815 ntBASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 VDAC1P7-201ENST00000462417 847 ntBASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 AC026410.3-201ENST00000514280 936 ntBASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 ENPP7P5-201ENST00000541031 1031 ntBASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 AC124283.3-201ENST00000570869 594 ntBASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms