Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 AC016700.1-201ENST00000429424 312 ntBASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 MIR5572-201ENST00000583188 137 ntBASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 TSPY26P-202ENST00000565928 3884 ntBASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 MIR33B-201ENST00000385104 96 ntBASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 CNN2P10-201ENST00000443067 918 ntBASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 AL589935.2-201ENST00000616471 1231 ntBASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.38■□□□□ 0.21
CTC1Q2NKJ3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 CYP46A4P-201ENST00000414953 267 ntBASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 RN7SL720P-201ENST00000488178 304 ntBASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms