Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.18■□□□□ 0.18
USP46P62068 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.18■□□□□ 0.18
USP46P62068 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.18■□□□□ 0.18
USP46P62068 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.18■□□□□ 0.18
USP46P62068 AP005482.1-201ENST00000563722 1273 ntBASIC16.18■□□□□ 0.18
USP46P62068 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.18■□□□□ 0.18
USP46P62068 AC133552.6-201ENST00000613406 534 ntBASIC16.18■□□□□ 0.18
USP46P62068 BX539320.1-201ENST00000623759 877 ntBASIC16.18■□□□□ 0.18
USP46P62068 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
USP46P62068 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.18■□□□□ 0.18
USP46P62068 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
USP46P62068 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
USP46P62068 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
USP46P62068 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
USP46P62068 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP46P62068 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
USP46P62068 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP46P62068 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.17■□□□□ 0.18
USP46P62068 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
USP46P62068 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP46P62068 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
USP46P62068 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.17■□□□□ 0.18
USP46P62068 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
USP46P62068 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP46P62068 RNU1-114P-201ENST00000365297 166 ntBASIC16.17■□□□□ 0.18
USP46P62068 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.17■□□□□ 0.18
USP46P62068 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.17■□□□□ 0.18
USP46P62068 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.17■□□□□ 0.18
USP46P62068 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP46P62068 KLF2P4-201ENST00000451959 1225 ntBASIC16.17■□□□□ 0.18
USP46P62068 BNIP3P42-201ENST00000454982 569 ntBASIC16.17■□□□□ 0.18
USP46P62068 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.17■□□□□ 0.18
USP46P62068 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.17■□□□□ 0.18
USP46P62068 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.17■□□□□ 0.18
USP46P62068 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.17■□□□□ 0.18
USP46P62068 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
USP46P62068 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.17■□□□□ 0.18
USP46P62068 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC16.17■□□□□ 0.18
USP46P62068 BNIP3P29-201ENST00000598302 571 ntBASIC16.17■□□□□ 0.18
USP46P62068 AP005019.2-201ENST00000615104 511 ntBASIC16.17■□□□□ 0.18
USP46P62068 AC011447.5-201ENST00000616168 564 ntBASIC16.17■□□□□ 0.18
USP46P62068 AP003400.6-201ENST00000624698 740 ntBASIC16.17■□□□□ 0.18
USP46P62068 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.17■□□□□ 0.18
USP46P62068 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP46P62068 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
USP46P62068 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.17■□□□□ 0.18
USP46P62068 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP46P62068 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP46P62068 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.17■□□□□ 0.18
USP46P62068 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
USP46P62068 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP46P62068 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.17■□□□□ 0.18
USP46P62068 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.17■□□□□ 0.18
USP46P62068 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.17■□□□□ 0.18
USP46P62068 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.17■□□□□ 0.18
USP46P62068 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP46P62068 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.17■□□□□ 0.18
USP46P62068 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.17■□□□□ 0.18
USP46P62068 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP46P62068 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.17■□□□□ 0.18
USP46P62068 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
USP46P62068 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
USP46P62068 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.16■□□□□ 0.18
USP46P62068 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.16■□□□□ 0.18
USP46P62068 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.16■□□□□ 0.18
USP46P62068 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.16■□□□□ 0.18
USP46P62068 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.16■□□□□ 0.18
USP46P62068 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.16■□□□□ 0.18
USP46P62068 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.16■□□□□ 0.18
USP46P62068 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.16■□□□□ 0.18
USP46P62068 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
USP46P62068 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.16■□□□□ 0.18
USP46P62068 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC16.16■□□□□ 0.18
USP46P62068 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.16■□□□□ 0.18
USP46P62068 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.16■□□□□ 0.18
USP46P62068 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.16■□□□□ 0.18
USP46P62068 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
USP46P62068 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.16■□□□□ 0.18
USP46P62068 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.16■□□□□ 0.18
USP46P62068 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.16■□□□□ 0.18
USP46P62068 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms