Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLDN20P56880 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.14□□□□□ -0.15
CLDN20P56880 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CLDN20P56880 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN20P56880 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN20P56880 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN20P56880 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLDN20P56880 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 CLK3P2-201ENST00000427566 1453 ntBASIC14.13□□□□□ -0.15
CLDN20P56880 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN20P56880 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN20P56880 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CLDN20P56880 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN20P56880 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDN20P56880 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CLDN20P56880 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.13□□□□□ -0.15
CLDN20P56880 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.13□□□□□ -0.15
CLDN20P56880 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN20P56880 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 AP005018.1-201ENST00000525475 301 ntBASIC14.13□□□□□ -0.15
CLDN20P56880 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.13□□□□□ -0.15
CLDN20P56880 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN20P56880 TP53TG3HP-202ENST00000569755 579 ntBASIC14.13□□□□□ -0.15
CLDN20P56880 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN20P56880 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN20P56880 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN20P56880 AC008494.3-201ENST00000606615 944 ntBASIC14.13□□□□□ -0.15
CLDN20P56880 AC007431.3-201ENST00000623221 587 ntBASIC14.13□□□□□ -0.15
CLDN20P56880 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 AC105233.6-201ENST00000642093 218 ntBASIC14.13□□□□□ -0.15
CLDN20P56880 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
CLDN20P56880 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN20P56880 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
CLDN20P56880 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CLDN20P56880 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN20P56880 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN20P56880 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN20P56880 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CLDN20P56880 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN20P56880 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CLDN20P56880 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN20P56880 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN20P56880 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.12□□□□□ -0.15
CLDN20P56880 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN20P56880 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN20P56880 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN20P56880 AC098850.1-201ENST00000419919 790 ntBASIC14.12□□□□□ -0.15
CLDN20P56880 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN20P56880 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN20P56880 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.12□□□□□ -0.15
CLDN20P56880 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.12□□□□□ -0.15
CLDN20P56880 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.12□□□□□ -0.15
CLDN20P56880 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN20P56880 AC123567.1-201ENST00000548294 1261 ntBASIC14.12□□□□□ -0.15
CLDN20P56880 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN20P56880 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
CLDN20P56880 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN20P56880 AC099568.2-201ENST00000609194 695 ntBASIC14.12□□□□□ -0.15
CLDN20P56880 MIR8072-201ENST00000614241 80 ntBASIC14.12□□□□□ -0.15
CLDN20P56880 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLDN20P56880 AC025048.6-201ENST00000634326 1161 ntBASIC14.12□□□□□ -0.15
CLDN20P56880 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms