Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
VCPP55072 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.48■□□□□ 0.23
VCPP55072 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCPP55072 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VCPP55072 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.48■□□□□ 0.23
VCPP55072 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.48■□□□□ 0.23
VCPP55072 CALR4P-201ENST00000431943 946 ntBASIC16.48■□□□□ 0.23
VCPP55072 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCPP55072 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
VCPP55072 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.48■□□□□ 0.23
VCPP55072 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.48■□□□□ 0.23
VCPP55072 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
VCPP55072 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.48■□□□□ 0.23
VCPP55072 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VCPP55072 CU634019.7-201ENST00000624153 1185 ntBASIC16.48■□□□□ 0.23
VCPP55072 FP236241.2-201ENST00000624906 1185 ntBASIC16.48■□□□□ 0.23
VCPP55072 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VCPP55072 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.48■□□□□ 0.23
VCPP55072 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCPP55072 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.48■□□□□ 0.23
VCPP55072 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VCPP55072 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
VCPP55072 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VCPP55072 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCPP55072 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCPP55072 AC009090.5-201ENST00000624886 2285 ntBASIC16.48■□□□□ 0.23
VCPP55072 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCPP55072 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCPP55072 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCPP55072 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VCPP55072 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VCPP55072 AC063926.3-201ENST00000624734 5658 ntBASIC16.48■□□□□ 0.23
VCPP55072 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
VCPP55072 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.47■□□□□ 0.23
VCPP55072 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
VCPP55072 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
VCPP55072 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VCPP55072 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.47■□□□□ 0.23
VCPP55072 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.47■□□□□ 0.23
VCPP55072 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.47■□□□□ 0.23
VCPP55072 ACTG1P3-201ENST00000431775 1114 ntBASIC16.47■□□□□ 0.23
VCPP55072 YBX1P6-201ENST00000442962 1002 ntBASIC16.47■□□□□ 0.23
VCPP55072 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.47■□□□□ 0.23
VCPP55072 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.47■□□□□ 0.23
VCPP55072 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.47■□□□□ 0.23
VCPP55072 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.47■□□□□ 0.23
VCPP55072 LINC01115-203ENST00000606068 577 ntBASIC16.47■□□□□ 0.23
VCPP55072 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.47■□□□□ 0.23
VCPP55072 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.47■□□□□ 0.23
VCPP55072 AC074044.1-201ENST00000609673 707 ntBASIC16.47■□□□□ 0.23
VCPP55072 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.47■□□□□ 0.23
VCPP55072 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VCPP55072 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
VCPP55072 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.47■□□□□ 0.23
VCPP55072 AC112693.3-201ENST00000624819 1983 ntBASIC16.47■□□□□ 0.23
VCPP55072 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VCPP55072 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.47■□□□□ 0.23
VCPP55072 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCPP55072 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.47■□□□□ 0.23
VCPP55072 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VCPP55072 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.46■□□□□ 0.23
VCPP55072 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.46■□□□□ 0.23
VCPP55072 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.46■□□□□ 0.23
VCPP55072 FO393414.2-201ENST00000405153 598 ntBASIC16.46■□□□□ 0.23
VCPP55072 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.46■□□□□ 0.23
VCPP55072 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.46■□□□□ 0.23
VCPP55072 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.46■□□□□ 0.23
VCPP55072 AL162726.2-201ENST00000438986 1017 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms