Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.77■□□□□ 0.28
CLCN3P51790 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CLCN3P51790 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.77■□□□□ 0.28
CLCN3P51790 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 AC112693.3-201ENST00000624819 1983 ntBASIC16.77■□□□□ 0.28
CLCN3P51790 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCN3P51790 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CLCN3P51790 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.77■□□□□ 0.28
CLCN3P51790 FAM8A4P-201ENST00000435433 1213 ntBASIC16.77■□□□□ 0.28
CLCN3P51790 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN3P51790 HOMER2P2-201ENST00000451621 847 ntBASIC16.77■□□□□ 0.28
CLCN3P51790 PFN1P12-201ENST00000455938 534 ntBASIC16.77■□□□□ 0.28
CLCN3P51790 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN3P51790 AC026434.2-201ENST00000506094 1078 ntBASIC16.77■□□□□ 0.28
CLCN3P51790 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.77■□□□□ 0.28
CLCN3P51790 FAM8A2P-201ENST00000528813 1142 ntBASIC16.77■□□□□ 0.28
CLCN3P51790 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCN3P51790 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCN3P51790 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCN3P51790 DUX4L47-201ENST00000566374 394 ntBASIC16.77■□□□□ 0.28
CLCN3P51790 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN3P51790 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.77■□□□□ 0.28
CLCN3P51790 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN3P51790 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN3P51790 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.77■□□□□ 0.27
CLCN3P51790 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
CLCN3P51790 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN3P51790 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN3P51790 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.77■□□□□ 0.27
CLCN3P51790 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CLCN3P51790 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.77■□□□□ 0.27
CLCN3P51790 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN3P51790 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN3P51790 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN3P51790 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN3P51790 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLCN3P51790 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CLCN3P51790 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCN3P51790 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLCN3P51790 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLCN3P51790 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CLCN3P51790 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.76■□□□□ 0.27
CLCN3P51790 AC099548.2-209ENST00000480264 625 ntBASIC16.76■□□□□ 0.27
CLCN3P51790 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 AP003171.2-201ENST00000528208 925 ntBASIC16.76■□□□□ 0.27
CLCN3P51790 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLCN3P51790 C2orf69P2-201ENST00000562032 1123 ntBASIC16.76■□□□□ 0.27
CLCN3P51790 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.76■□□□□ 0.27
CLCN3P51790 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLCN3P51790 OR10B1P-201ENST00000601666 907 ntBASIC16.76■□□□□ 0.27
CLCN3P51790 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.76■□□□□ 0.27
CLCN3P51790 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
CLCN3P51790 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.76■□□□□ 0.27
CLCN3P51790 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
CLCN3P51790 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCN3P51790 SSR4P1-203ENST00000599569 2260 ntBASIC16.76■□□□□ 0.27
CLCN3P51790 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.76■□□□□ 0.27
CLCN3P51790 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN3P51790 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLCN3P51790 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLCN3P51790 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN3P51790 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLCN3P51790 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CLCN3P51790 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms