Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC023824.1-201ENST00000562945 2975 ntBASIC17.29■□□□□ 0.36
USP11P51784 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
USP11P51784 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
USP11P51784 REXO1L2P-201ENST00000425429 2069 ntBASIC17.29■□□□□ 0.36
USP11P51784 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.29■□□□□ 0.36
USP11P51784 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 AC079776.1-201ENST00000401540 1152 ntBASIC17.29■□□□□ 0.36
USP11P51784 EIF3FP3-201ENST00000434851 1086 ntBASIC17.29■□□□□ 0.36
USP11P51784 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.29■□□□□ 0.36
USP11P51784 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
USP11P51784 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.29■□□□□ 0.36
USP11P51784 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.29■□□□□ 0.36
USP11P51784 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.29■□□□□ 0.36
USP11P51784 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.29■□□□□ 0.36
USP11P51784 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
USP11P51784 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 ZBED1P1-201ENST00000502364 1930 ntBASIC17.29■□□□□ 0.36
USP11P51784 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.29■□□□□ 0.36
USP11P51784 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.28■□□□□ 0.36
USP11P51784 LILRP1-201ENST00000444199 1370 ntBASIC17.28■□□□□ 0.36
USP11P51784 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
USP11P51784 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.28■□□□□ 0.36
USP11P51784 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
USP11P51784 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.28■□□□□ 0.36
USP11P51784 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.28■□□□□ 0.36
USP11P51784 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
USP11P51784 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.28■□□□□ 0.36
USP11P51784 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
USP11P51784 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
USP11P51784 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.28■□□□□ 0.36
USP11P51784 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
USP11P51784 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.28■□□□□ 0.36
USP11P51784 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.28■□□□□ 0.36
USP11P51784 AC112492.5-201ENST00000421897 457 ntBASIC17.28■□□□□ 0.36
USP11P51784 AC016694.1-201ENST00000434179 700 ntBASIC17.28■□□□□ 0.36
USP11P51784 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
USP11P51784 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.28■□□□□ 0.36
USP11P51784 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.28■□□□□ 0.36
USP11P51784 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.28■□□□□ 0.36
USP11P51784 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.28■□□□□ 0.36
USP11P51784 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.28■□□□□ 0.36
USP11P51784 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.28■□□□□ 0.36
USP11P51784 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.28■□□□□ 0.36
USP11P51784 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.28■□□□□ 0.36
USP11P51784 AC025279.2-201ENST00000569730 653 ntBASIC17.28■□□□□ 0.36
USP11P51784 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.28■□□□□ 0.36
USP11P51784 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.28■□□□□ 0.36
USP11P51784 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
USP11P51784 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.28■□□□□ 0.36
USP11P51784 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
USP11P51784 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
USP11P51784 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.28■□□□□ 0.36
USP11P51784 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
USP11P51784 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP11P51784 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.27■□□□□ 0.36
USP11P51784 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.27■□□□□ 0.36
USP11P51784 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP11P51784 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.27■□□□□ 0.36
USP11P51784 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP11P51784 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP11P51784 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.27■□□□□ 0.36
USP11P51784 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP11P51784 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP11P51784 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP11P51784 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
USP11P51784 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP11P51784 BOLA2P3-201ENST00000404566 256 ntBASIC17.27■□□□□ 0.36
USP11P51784 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.27■□□□□ 0.36
USP11P51784 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.27■□□□□ 0.36
USP11P51784 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.27■□□□□ 0.36
USP11P51784 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.27■□□□□ 0.36
USP11P51784 RAB43P1-201ENST00000561790 589 ntBASIC17.27■□□□□ 0.36
USP11P51784 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.27■□□□□ 0.36
USP11P51784 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
USP11P51784 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP11P51784 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms