Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.27□□□□□ -0.29
HCFC1P51610 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.27□□□□□ -0.29
HCFC1P51610 RN7SL11P-201ENST00000471305 293 ntBASIC13.27□□□□□ -0.29
HCFC1P51610 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.27□□□□□ -0.29
HCFC1P51610 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HCFC1P51610 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HCFC1P51610 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.27□□□□□ -0.29
HCFC1P51610 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.27□□□□□ -0.29
HCFC1P51610 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.27□□□□□ -0.29
HCFC1P51610 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HCFC1P51610 AC004466.1-201ENST00000599515 1080 ntBASIC13.27□□□□□ -0.29
HCFC1P51610 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.27□□□□□ -0.29
HCFC1P51610 AL023803.2-201ENST00000620080 638 ntBASIC13.27□□□□□ -0.29
HCFC1P51610 AC079336.7-201ENST00000623428 1078 ntBASIC13.27□□□□□ -0.29
HCFC1P51610 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HCFC1P51610 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.27□□□□□ -0.29
HCFC1P51610 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HCFC1P51610 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HCFC1P51610 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.26□□□□□ -0.29
HCFC1P51610 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
HCFC1P51610 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.26□□□□□ -0.29
HCFC1P51610 AC004899.1-201ENST00000424687 1714 ntBASIC13.26□□□□□ -0.29
HCFC1P51610 AL596087.1-201ENST00000400979 1969 ntBASIC13.26□□□□□ -0.29
HCFC1P51610 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.26□□□□□ -0.29
HCFC1P51610 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
HCFC1P51610 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.26□□□□□ -0.29
HCFC1P51610 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.26□□□□□ -0.29
HCFC1P51610 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.26□□□□□ -0.29
HCFC1P51610 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.26□□□□□ -0.29
HCFC1P51610 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.26□□□□□ -0.29
HCFC1P51610 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 RNMTL1P1-201ENST00000454103 560 ntBASIC13.26□□□□□ -0.29
HCFC1P51610 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 RN7SL720P-201ENST00000488178 304 ntBASIC13.26□□□□□ -0.29
HCFC1P51610 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.26□□□□□ -0.29
HCFC1P51610 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.26□□□□□ -0.29
HCFC1P51610 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
HCFC1P51610 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.26□□□□□ -0.29
HCFC1P51610 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.26□□□□□ -0.29
HCFC1P51610 OR10B1P-201ENST00000601666 907 ntBASIC13.26□□□□□ -0.29
HCFC1P51610 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.26□□□□□ -0.29
HCFC1P51610 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.26□□□□□ -0.29
HCFC1P51610 AC068587.8-201ENST00000641239 219 ntBASIC13.26□□□□□ -0.29
HCFC1P51610 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.26□□□□□ -0.29
HCFC1P51610 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HCFC1P51610 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.26□□□□□ -0.29
HCFC1P51610 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
HCFC1P51610 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
HCFC1P51610 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
HCFC1P51610 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.26□□□□□ -0.29
HCFC1P51610 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HCFC1P51610 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
HCFC1P51610 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
HCFC1P51610 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HCFC1P51610 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 AC091046.1-201ENST00000331871 207 ntBASIC13.25□□□□□ -0.29
HCFC1P51610 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 RN7SKP175-201ENST00000408472 289 ntBASIC13.25□□□□□ -0.29
HCFC1P51610 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.25□□□□□ -0.29
HCFC1P51610 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.25□□□□□ -0.29
HCFC1P51610 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.25□□□□□ -0.29
HCFC1P51610 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.25□□□□□ -0.29
HCFC1P51610 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.25□□□□□ -0.29
HCFC1P51610 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HCFC1P51610 KRT8P4-201ENST00000509735 1454 ntBASIC13.25□□□□□ -0.29
HCFC1P51610 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.25□□□□□ -0.29
HCFC1P51610 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.25□□□□□ -0.29
HCFC1P51610 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
HCFC1P51610 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HCFC1P51610 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms