Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB28P51157 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB28P51157 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RAB28P51157 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RAB28P51157 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 AC104640.1-201ENST00000562617 2109 ntBASIC14.8□□□□□ -0.04
RAB28P51157 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.8□□□□□ -0.04
RAB28P51157 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB28P51157 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 AC005229.1-201ENST00000392885 409 ntBASIC14.8□□□□□ -0.04
RAB28P51157 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RAB28P51157 ACTBP8-201ENST00000403258 1108 ntBASIC14.8□□□□□ -0.04
RAB28P51157 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB28P51157 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RAB28P51157 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB28P51157 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB28P51157 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAB28P51157 BTNL10-201ENST00000595971 695 ntBASIC14.8□□□□□ -0.04
RAB28P51157 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAB28P51157 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAB28P51157 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 KRT8P35-201ENST00000483942 1338 ntBASIC14.8□□□□□ -0.04
RAB28P51157 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB28P51157 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB28P51157 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RAB28P51157 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RAB28P51157 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB28P51157 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB28P51157 AC023157.3-201ENST00000619086 2088 ntBASIC14.8□□□□□ -0.04
RAB28P51157 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB28P51157 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB28P51157 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB28P51157 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB28P51157 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RAB28P51157 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
RAB28P51157 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB28P51157 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB28P51157 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAB28P51157 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB28P51157 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB28P51157 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB28P51157 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB28P51157 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB28P51157 AP001889.1-201ENST00000525414 633 ntBASIC14.79□□□□□ -0.04
RAB28P51157 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RAB28P51157 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB28P51157 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB28P51157 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAB28P51157 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB28P51157 AP000845.1-201ENST00000581677 2131 ntBASIC14.79□□□□□ -0.04
RAB28P51157 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
RAB28P51157 AL022328.1-201ENST00000610050 478 ntBASIC14.79□□□□□ -0.04
RAB28P51157 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB28P51157 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.79□□□□□ -0.04
RAB28P51157 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB28P51157 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB28P51157 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RAB28P51157 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAB28P51157 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB28P51157 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB28P51157 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB28P51157 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB28P51157 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms