Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TUBP50607 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBP50607 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.21■□□□□ 0.18
TUBP50607 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.21■□□□□ 0.18
TUBP50607 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.21■□□□□ 0.18
TUBP50607 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TUBP50607 AC139749.1-202ENST00000617529 3139 ntBASIC16.21■□□□□ 0.18
TUBP50607 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.21■□□□□ 0.18
TUBP50607 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TUBP50607 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.2■□□□□ 0.18
TUBP50607 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBP50607 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TUBP50607 AC005229.1-201ENST00000392885 409 ntBASIC16.2■□□□□ 0.18
TUBP50607 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.2■□□□□ 0.18
TUBP50607 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.2■□□□□ 0.18
TUBP50607 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.2■□□□□ 0.18
TUBP50607 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.2■□□□□ 0.18
TUBP50607 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.2■□□□□ 0.18
TUBP50607 AC068587.3-201ENST00000526613 355 ntBASIC16.2■□□□□ 0.18
TUBP50607 SLC25A47P1-201ENST00000531577 414 ntBASIC16.2■□□□□ 0.18
TUBP50607 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.2■□□□□ 0.18
TUBP50607 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBP50607 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TUBP50607 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBP50607 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.2■□□□□ 0.18
TUBP50607 AC005252.2-201ENST00000624630 1141 ntBASIC16.2■□□□□ 0.18
TUBP50607 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBP50607 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBP50607 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TUBP50607 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.2■□□□□ 0.18
TUBP50607 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TUBP50607 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TUBP50607 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBP50607 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TUBP50607 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.2■□□□□ 0.18
TUBP50607 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBP50607 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TUBP50607 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBP50607 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TUBP50607 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TUBP50607 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TUBP50607 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TUBP50607 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBP50607 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBP50607 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBP50607 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBP50607 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
TUBP50607 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBP50607 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBP50607 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBP50607 AL512343.1-201ENST00000605837 169 ntBASIC16.19■□□□□ 0.18
TUBP50607 AL022328.1-201ENST00000610050 478 ntBASIC16.19■□□□□ 0.18
TUBP50607 MIR6805-201ENST00000615055 62 ntBASIC16.19■□□□□ 0.18
TUBP50607 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TUBP50607 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBP50607 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TUBP50607 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBP50607 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TUBP50607 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBP50607 AC105250.1-201ENST00000509378 2057 ntBASIC16.18■□□□□ 0.18
TUBP50607 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBP50607 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBP50607 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBP50607 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms