Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 AC020658.7-201ENST00000624274 2442 ntBASIC15.46■□□□□ 0.07
LSP1P33241 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
LSP1P33241 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.46■□□□□ 0.07
LSP1P33241 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.46■□□□□ 0.07
LSP1P33241 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
LSP1P33241 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LSP1P33241 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
LSP1P33241 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 KRT18P27-201ENST00000427733 1299 ntBASIC15.46■□□□□ 0.07
LSP1P33241 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.46■□□□□ 0.07
LSP1P33241 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LSP1P33241 PRYP6-201ENST00000514804 343 ntBASIC15.46■□□□□ 0.07
LSP1P33241 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LSP1P33241 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.46■□□□□ 0.07
LSP1P33241 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.46■□□□□ 0.07
LSP1P33241 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.46■□□□□ 0.07
LSP1P33241 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.46■□□□□ 0.07
LSP1P33241 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.46■□□□□ 0.07
LSP1P33241 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSP1P33241 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
LSP1P33241 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LSP1P33241 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.46■□□□□ 0.06
LSP1P33241 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LSP1P33241 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LSP1P33241 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
LSP1P33241 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
LSP1P33241 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LSP1P33241 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.45■□□□□ 0.06
LSP1P33241 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LSP1P33241 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 AC118758.2-201ENST00000614242 2813 ntBASIC15.45■□□□□ 0.06
LSP1P33241 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
LSP1P33241 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
LSP1P33241 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.45■□□□□ 0.06
LSP1P33241 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.45■□□□□ 0.06
LSP1P33241 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 KRT8P37-201ENST00000451609 1420 ntBASIC15.45■□□□□ 0.06
LSP1P33241 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.45■□□□□ 0.06
LSP1P33241 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.45■□□□□ 0.06
LSP1P33241 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.45■□□□□ 0.06
LSP1P33241 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LSP1P33241 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LSP1P33241 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 AC073621.1-201ENST00000392730 636 ntBASIC15.45■□□□□ 0.06
LSP1P33241 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 RPS8P6-201ENST00000426177 609 ntBASIC15.45■□□□□ 0.06
LSP1P33241 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LSP1P33241 MIR3180-1-201ENST00000580374 94 ntBASIC15.45■□□□□ 0.06
LSP1P33241 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.45■□□□□ 0.06
LSP1P33241 MIR3180-3-201ENST00000584616 94 ntBASIC15.45■□□□□ 0.06
LSP1P33241 AC025062.2-201ENST00000605477 670 ntBASIC15.45■□□□□ 0.06
LSP1P33241 AL121772.3-201ENST00000610840 674 ntBASIC15.45■□□□□ 0.06
LSP1P33241 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.45■□□□□ 0.06
LSP1P33241 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.45■□□□□ 0.06
LSP1P33241 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.45■□□□□ 0.06
LSP1P33241 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.45■□□□□ 0.06
LSP1P33241 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LSP1P33241 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.45■□□□□ 0.06
LSP1P33241 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.45■□□□□ 0.06
LSP1P33241 AL136982.4-201ENST00000437689 1740 ntBASIC15.45■□□□□ 0.06
LSP1P33241 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.45■□□□□ 0.06
LSP1P33241 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.45■□□□□ 0.06
LSP1P33241 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSP1P33241 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms