Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC21.1■□□□□ 0.97
CPS1P31327 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPS1P31327 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC21.1■□□□□ 0.97
CPS1P31327 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.09■□□□□ 0.97
CPS1P31327 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC21.09■□□□□ 0.97
CPS1P31327 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC21.09■□□□□ 0.97
CPS1P31327 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CPS1P31327 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC21.09■□□□□ 0.97
CPS1P31327 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC21.09■□□□□ 0.97
CPS1P31327 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC21.09■□□□□ 0.97
CPS1P31327 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CPS1P31327 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
CPS1P31327 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
CPS1P31327 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC21.09■□□□□ 0.97
CPS1P31327 SLC9A7P1-202ENST00000556476 2239 ntBASIC21.09■□□□□ 0.97
CPS1P31327 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 AC006449.5-201ENST00000610658 2098 ntBASIC21.09■□□□□ 0.97
CPS1P31327 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CPS1P31327 AC004554.1-201ENST00000422830 1468 ntBASIC21.09■□□□□ 0.97
CPS1P31327 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CPS1P31327 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 STK33-217ENST00000534493 1895 ntTSL 2 BASIC21.09■□□□□ 0.97
CPS1P31327 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC21.09■□□□□ 0.97
CPS1P31327 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CPS1P31327 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CPS1P31327 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPS1P31327 SERF2-209ENST00000409646 559 ntTSL 4 BASIC21.09■□□□□ 0.97
CPS1P31327 AC093909.3-201ENST00000504783 336 ntBASIC21.09■□□□□ 0.97
CPS1P31327 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC21.09■□□□□ 0.97
CPS1P31327 CR383656.3-201ENST00000551315 183 ntBASIC21.09■□□□□ 0.97
CPS1P31327 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC21.09■□□□□ 0.97
CPS1P31327 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC21.09■□□□□ 0.97
CPS1P31327 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC21.09■□□□□ 0.97
CPS1P31327 MIR3180-2-201ENST00000581748 88 ntBASIC21.09■□□□□ 0.97
CPS1P31327 AC055811.3-201ENST00000584952 686 ntBASIC21.09■□□□□ 0.97
CPS1P31327 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CPS1P31327 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC21.09■□□□□ 0.97
CPS1P31327 AL451007.2-201ENST00000632004 563 ntBASIC21.09■□□□□ 0.97
CPS1P31327 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC21.09■□□□□ 0.97
CPS1P31327 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPS1P31327 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPS1P31327 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPS1P31327 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC21.08■□□□□ 0.97
CPS1P31327 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC21.08■□□□□ 0.97
CPS1P31327 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC21.08■□□□□ 0.97
CPS1P31327 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CPS1P31327 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPS1P31327 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPS1P31327 FAM90A21P-201ENST00000510875 1396 ntBASIC21.08■□□□□ 0.97
CPS1P31327 FAM90A15P-201ENST00000514465 1395 ntBASIC21.08■□□□□ 0.97
CPS1P31327 FAM90A6P-201ENST00000515148 1394 ntBASIC21.08■□□□□ 0.97
CPS1P31327 FAM90A16P-201ENST00000526662 1395 ntBASIC21.08■□□□□ 0.97
CPS1P31327 FAM90A9P-201ENST00000527940 1395 ntBASIC21.08■□□□□ 0.97
CPS1P31327 FAM90A5P-201ENST00000528738 1395 ntBASIC21.08■□□□□ 0.97
CPS1P31327 FAM90A14P-201ENST00000530386 1395 ntBASIC21.08■□□□□ 0.97
CPS1P31327 FAM90A13P-201ENST00000534703 1395 ntBASIC21.08■□□□□ 0.97
CPS1P31327 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CPS1P31327 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC21.08■□□□□ 0.96
CPS1P31327 AL360270.3-201ENST00000609118 1348 ntBASIC21.08■□□□□ 0.96
CPS1P31327 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC21.08■□□□□ 0.96
CPS1P31327 SUPT20HL2-201ENST00000486479 2409 ntBASIC21.08■□□□□ 0.96
CPS1P31327 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPS1P31327 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CPS1P31327 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPS1P31327 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC21.08■□□□□ 0.96
CPS1P31327 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC21.08■□□□□ 0.96
CPS1P31327 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CPS1P31327 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC21.08■□□□□ 0.96
CPS1P31327 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CPS1P31327 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPS1P31327 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
CPS1P31327 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CPS1P31327 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.07■□□□□ 0.96
CPS1P31327 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPS1P31327 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CPS1P31327 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC21.07■□□□□ 0.96
CPS1P31327 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPS1P31327 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPS1P31327 LINC01165-201ENST00000445190 1623 ntBASIC21.07■□□□□ 0.96
CPS1P31327 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPS1P31327 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPS1P31327 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC21.07■□□□□ 0.96
CPS1P31327 AQP7P5-201ENST00000428759 1049 ntBASIC21.07■□□□□ 0.96
CPS1P31327 TSPY25P-201ENST00000429463 745 ntBASIC21.07■□□□□ 0.96
CPS1P31327 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC21.07■□□□□ 0.96
CPS1P31327 AQP7P4-201ENST00000447083 1042 ntBASIC21.07■□□□□ 0.96
CPS1P31327 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms