Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 REXO1L4P-201ENST00000605109 1937 ntBASIC15.53■□□□□ 0.08
HLA-DPA1P20036 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 AC007541.1-201ENST00000570282 1469 ntBASIC15.52■□□□□ 0.08
HLA-DPA1P20036 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 MIR661-201ENST00000384842 89 ntBASIC15.52■□□□□ 0.08
HLA-DPA1P20036 AC236430.1-201ENST00000402231 743 ntBASIC15.52■□□□□ 0.08
HLA-DPA1P20036 AL442647.2-201ENST00000429864 857 ntBASIC15.52■□□□□ 0.08
HLA-DPA1P20036 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 AL353779.1-201ENST00000434793 351 ntBASIC15.52■□□□□ 0.08
HLA-DPA1P20036 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 AC002472.2-201ENST00000442739 958 ntBASIC15.52■□□□□ 0.08
HLA-DPA1P20036 VDAC1P7-201ENST00000462417 847 ntBASIC15.52■□□□□ 0.08
HLA-DPA1P20036 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPA1P20036 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DPA1P20036 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DPA1P20036 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.52■□□□□ 0.07
HLA-DPA1P20036 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.52■□□□□ 0.07
HLA-DPA1P20036 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
HLA-DPA1P20036 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.52■□□□□ 0.07
HLA-DPA1P20036 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
HLA-DPA1P20036 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
HLA-DPA1P20036 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DPA1P20036 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DPA1P20036 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DPA1P20036 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DPA1P20036 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.52■□□□□ 0.07
HLA-DPA1P20036 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 INTS4P2-202ENST00000614726 2019 ntBASIC15.51■□□□□ 0.07
HLA-DPA1P20036 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.51■□□□□ 0.07
HLA-DPA1P20036 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 AC123567.1-201ENST00000548294 1261 ntBASIC15.51■□□□□ 0.07
HLA-DPA1P20036 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 AC093813.1-201ENST00000605066 256 ntBASIC15.51■□□□□ 0.07
HLA-DPA1P20036 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DPA1P20036 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms