Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NELFEP18615 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.28■□□□□ 0.04
NELFEP18615 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 DGCR5-201ENST00000399539 862 ntBASIC15.28■□□□□ 0.04
NELFEP18615 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.28■□□□□ 0.04
NELFEP18615 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.28■□□□□ 0.04
NELFEP18615 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.28■□□□□ 0.04
NELFEP18615 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.28■□□□□ 0.04
NELFEP18615 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.28■□□□□ 0.04
NELFEP18615 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.28■□□□□ 0.04
NELFEP18615 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.28■□□□□ 0.04
NELFEP18615 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
NELFEP18615 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.28■□□□□ 0.04
NELFEP18615 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.28■□□□□ 0.04
NELFEP18615 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NELFEP18615 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFEP18615 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFEP18615 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFEP18615 AP001282.1-201ENST00000531301 1499 ntBASIC15.27■□□□□ 0.04
NELFEP18615 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NELFEP18615 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
NELFEP18615 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFEP18615 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.27■□□□□ 0.04
NELFEP18615 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFEP18615 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NELFEP18615 PTENP1-202ENST00000532280 3996 ntBASIC15.27■□□□□ 0.04
NELFEP18615 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NELFEP18615 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.27■□□□□ 0.04
NELFEP18615 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFEP18615 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFEP18615 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NELFEP18615 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NELFEP18615 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFEP18615 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NELFEP18615 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.27■□□□□ 0.04
NELFEP18615 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.27■□□□□ 0.04
NELFEP18615 AZGP1P1-201ENST00000411909 902 ntBASIC15.27■□□□□ 0.04
NELFEP18615 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.27■□□□□ 0.04
NELFEP18615 KRT17P7-201ENST00000451704 1104 ntBASIC15.27■□□□□ 0.04
NELFEP18615 MEIS3P1-201ENST00000495167 958 ntBASIC15.27■□□□□ 0.04
NELFEP18615 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.27■□□□□ 0.04
NELFEP18615 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.27■□□□□ 0.04
NELFEP18615 AC008494.3-201ENST00000606615 944 ntBASIC15.27■□□□□ 0.04
NELFEP18615 AC007191.1-201ENST00000623179 2995 ntBASIC15.27■□□□□ 0.04
NELFEP18615 AC007431.3-201ENST00000623221 587 ntBASIC15.27■□□□□ 0.04
NELFEP18615 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.27■□□□□ 0.03
NELFEP18615 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.27■□□□□ 0.03
NELFEP18615 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.27■□□□□ 0.03
NELFEP18615 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NELFEP18615 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NELFEP18615 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.27■□□□□ 0.03
NELFEP18615 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NELFEP18615 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NELFEP18615 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.27■□□□□ 0.03
NELFEP18615 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NELFEP18615 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NELFEP18615 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NELFEP18615 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NELFEP18615 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFEP18615 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.26■□□□□ 0.03
NELFEP18615 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFEP18615 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFEP18615 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFEP18615 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFEP18615 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NELFEP18615 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFEP18615 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.26■□□□□ 0.03
NELFEP18615 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFEP18615 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.26■□□□□ 0.03
NELFEP18615 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
NELFEP18615 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.26■□□□□ 0.03
NELFEP18615 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFEP18615 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFEP18615 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NELFEP18615 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFEP18615 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NELFEP18615 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFEP18615 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NELFEP18615 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
NELFEP18615 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms