Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PSMC3P17980 KRT8P13-201ENST00000463294 1010 ntBASIC16.06■□□□□ 0.16
PSMC3P17980 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.06■□□□□ 0.16
PSMC3P17980 FAM86HP-204ENST00000513466 959 ntBASIC16.06■□□□□ 0.16
PSMC3P17980 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.06■□□□□ 0.16
PSMC3P17980 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.06■□□□□ 0.16
PSMC3P17980 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.06■□□□□ 0.16
PSMC3P17980 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.06■□□□□ 0.16
PSMC3P17980 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.06■□□□□ 0.16
PSMC3P17980 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.06■□□□□ 0.16
PSMC3P17980 AC132938.4-201ENST00000623835 848 ntBASIC16.06■□□□□ 0.16
PSMC3P17980 AL139099.5-201ENST00000635274 300 ntBASIC16.06■□□□□ 0.16
PSMC3P17980 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PSMC3P17980 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PSMC3P17980 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PSMC3P17980 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
PSMC3P17980 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.05■□□□□ 0.16
PSMC3P17980 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.05■□□□□ 0.16
PSMC3P17980 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PSMC3P17980 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.05■□□□□ 0.16
PSMC3P17980 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.05■□□□□ 0.16
PSMC3P17980 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
PSMC3P17980 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.05■□□□□ 0.16
PSMC3P17980 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PSMC3P17980 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 MIR326-201ENST00000362220 95 ntBASIC16.05■□□□□ 0.16
PSMC3P17980 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.05■□□□□ 0.16
PSMC3P17980 FAM197Y7-201ENST00000432892 766 ntBASIC16.05■□□□□ 0.16
PSMC3P17980 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 AC006033.1-201ENST00000440505 426 ntBASIC16.05■□□□□ 0.16
PSMC3P17980 GAPDHP40-201ENST00000505218 1006 ntBASIC16.05■□□□□ 0.16
PSMC3P17980 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.05■□□□□ 0.16
PSMC3P17980 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PSMC3P17980 C2orf69P2-201ENST00000562032 1123 ntBASIC16.05■□□□□ 0.16
PSMC3P17980 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.05■□□□□ 0.16
PSMC3P17980 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.05■□□□□ 0.16
PSMC3P17980 AL118558.3-201ENST00000607414 1079 ntBASIC16.05■□□□□ 0.16
PSMC3P17980 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.05■□□□□ 0.16
PSMC3P17980 AC145423.3-201ENST00000615987 467 ntBASIC16.05■□□□□ 0.16
PSMC3P17980 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.05■□□□□ 0.16
PSMC3P17980 AC138951.2-201ENST00000623455 1161 ntBASIC16.05■□□□□ 0.16
PSMC3P17980 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 AC126755.1-201ENST00000525846 6405 ntBASIC16.05■□□□□ 0.16
PSMC3P17980 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PSMC3P17980 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMC3P17980 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMC3P17980 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMC3P17980 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMC3P17980 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PSMC3P17980 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PSMC3P17980 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.04■□□□□ 0.16
PSMC3P17980 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.04■□□□□ 0.16
PSMC3P17980 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMC3P17980 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMC3P17980 AHCYP2-201ENST00000430630 1300 ntBASIC16.04■□□□□ 0.16
PSMC3P17980 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMC3P17980 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.04■□□□□ 0.16
PSMC3P17980 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMC3P17980 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PSMC3P17980 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMC3P17980 GOLGA2P4-201ENST00000441462 777 ntBASIC16.04■□□□□ 0.16
PSMC3P17980 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PSMC3P17980 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.04■□□□□ 0.16
PSMC3P17980 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PSMC3P17980 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.04■□□□□ 0.16
PSMC3P17980 AC078819.1-201ENST00000547454 765 ntBASIC16.04■□□□□ 0.16
PSMC3P17980 AC012085.1-201ENST00000548270 765 ntBASIC16.04■□□□□ 0.16
PSMC3P17980 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.04■□□□□ 0.16
PSMC3P17980 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms