Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.08■□□□□ 0.16
RB1P06400 RTN3P1-201ENST00000536295 711 ntBASIC16.08■□□□□ 0.16
RB1P06400 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.08■□□□□ 0.16
RB1P06400 AL160314.3-201ENST00000556041 767 ntBASIC16.08■□□□□ 0.16
RB1P06400 AC242376.1-201ENST00000559033 726 ntBASIC16.08■□□□□ 0.16
RB1P06400 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.08■□□□□ 0.16
RB1P06400 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 AC073352.2-201ENST00000609385 439 ntBASIC16.08■□□□□ 0.16
RB1P06400 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.08■□□□□ 0.16
RB1P06400 AC011491.1-203ENST00000637688 543 ntBASIC16.08■□□□□ 0.16
RB1P06400 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.08■□□□□ 0.16
RB1P06400 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RB1P06400 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.08■□□□□ 0.16
RB1P06400 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
RB1P06400 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.08■□□□□ 0.16
RB1P06400 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.07■□□□□ 0.16
RB1P06400 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.07■□□□□ 0.16
RB1P06400 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RB1P06400 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RB1P06400 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RB1P06400 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.07■□□□□ 0.16
RB1P06400 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.07■□□□□ 0.16
RB1P06400 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.07■□□□□ 0.16
RB1P06400 AC026434.2-201ENST00000506094 1078 ntBASIC16.07■□□□□ 0.16
RB1P06400 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.07■□□□□ 0.16
RB1P06400 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.07■□□□□ 0.16
RB1P06400 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.07■□□□□ 0.16
RB1P06400 AC008825.2-201ENST00000603374 718 ntBASIC16.07■□□□□ 0.16
RB1P06400 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RB1P06400 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.07■□□□□ 0.16
RB1P06400 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RB1P06400 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.07■□□□□ 0.16
RB1P06400 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.07■□□□□ 0.16
RB1P06400 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.07■□□□□ 0.16
RB1P06400 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RB1P06400 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 PCDHA14-201ENST00000506751 2298 ntBASIC16.06■□□□□ 0.16
RB1P06400 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.06■□□□□ 0.16
RB1P06400 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RB1P06400 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 AC127383.1-201ENST00000444697 1800 ntBASIC16.06■□□□□ 0.16
RB1P06400 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.06■□□□□ 0.16
RB1P06400 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RB1P06400 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.06■□□□□ 0.16
RB1P06400 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
RB1P06400 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.06■□□□□ 0.16
RB1P06400 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.06■□□□□ 0.16
RB1P06400 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RB1P06400 AC012441.2-201ENST00000444843 739 ntBASIC16.06■□□□□ 0.16
RB1P06400 HLA-J-204ENST00000495278 958 ntBASIC16.06■□□□□ 0.16
RB1P06400 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.06■□□□□ 0.16
RB1P06400 PGAM1P5-201ENST00000548011 764 ntBASIC16.06■□□□□ 0.16
RB1P06400 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RB1P06400 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RB1P06400 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
RB1P06400 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms