Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.94□□□□□ -0.34
CD74P04233 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.94□□□□□ -0.34
CD74P04233 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.94□□□□□ -0.34
CD74P04233 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 COL6A4P2-202ENST00000504443 2753 ntBASIC12.94□□□□□ -0.34
CD74P04233 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CD74P04233 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CD74P04233 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.94□□□□□ -0.34
CD74P04233 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.94□□□□□ -0.34
CD74P04233 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
CD74P04233 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
CD74P04233 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CD74P04233 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.93□□□□□ -0.34
CD74P04233 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.93□□□□□ -0.34
CD74P04233 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.93□□□□□ -0.34
CD74P04233 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CD74P04233 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.93□□□□□ -0.34
CD74P04233 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.93□□□□□ -0.34
CD74P04233 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.93□□□□□ -0.34
CD74P04233 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CD74P04233 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.93□□□□□ -0.34
CD74P04233 AC112191.1-201ENST00000523689 701 ntBASIC12.93□□□□□ -0.34
CD74P04233 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.93□□□□□ -0.34
CD74P04233 AC015910.1-201ENST00000579400 975 ntBASIC12.93□□□□□ -0.34
CD74P04233 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.93□□□□□ -0.34
CD74P04233 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 MIR7706-201ENST00000613747 67 ntBASIC12.93□□□□□ -0.34
CD74P04233 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.93□□□□□ -0.34
CD74P04233 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.93□□□□□ -0.34
CD74P04233 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.93□□□□□ -0.34
CD74P04233 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 AC027612.1-201ENST00000445234 2395 ntBASIC12.93□□□□□ -0.34
CD74P04233 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CD74P04233 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CD74P04233 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD74P04233 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.92□□□□□ -0.34
CD74P04233 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.92□□□□□ -0.34
CD74P04233 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
CD74P04233 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CD74P04233 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.92□□□□□ -0.34
CD74P04233 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.92□□□□□ -0.34
CD74P04233 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.92□□□□□ -0.34
CD74P04233 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms