Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
USH2AO75445 PHF23-213ENST00000613632 850 ntTSL 5 BASIC6.65□□□□□ -1.34
USH2AO75445 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC6.65□□□□□ -1.34
USH2AO75445 AC055811.4-201ENST00000624039 1754 ntBASIC6.65□□□□□ -1.34
USH2AO75445 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 PRAL-201ENST00000624952 3286 ntBASIC6.65□□□□□ -1.34
USH2AO75445 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC6.65□□□□□ -1.34
USH2AO75445 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
USH2AO75445 AC080080.1-201ENST00000625121 2420 ntBASIC6.65□□□□□ -1.34
USH2AO75445 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC6.65□□□□□ -1.34
USH2AO75445 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC6.65□□□□□ -1.34
USH2AO75445 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC6.65□□□□□ -1.34
USH2AO75445 RPS18P9-201ENST00000482817 460 ntBASIC6.65□□□□□ -1.34
USH2AO75445 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC6.65□□□□□ -1.34
USH2AO75445 OR2A1-AS1-210ENST00000496968 531 ntBASIC6.65□□□□□ -1.34
USH2AO75445 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC6.65□□□□□ -1.34
USH2AO75445 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
USH2AO75445 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
USH2AO75445 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC6.65□□□□□ -1.34
USH2AO75445 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
USH2AO75445 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC6.65□□□□□ -1.34
USH2AO75445 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC6.65□□□□□ -1.34
USH2AO75445 RNA5SP359-201ENST00000364838 113 ntBASIC6.65□□□□□ -1.34
USH2AO75445 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC6.65□□□□□ -1.34
USH2AO75445 SKA2-202ENST00000437036 625 ntTSL 2 BASIC6.65□□□□□ -1.34
USH2AO75445 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC6.65□□□□□ -1.34
USH2AO75445 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC6.65□□□□□ -1.34
USH2AO75445 BPIFB5P-201ENST00000457066 1099 ntBASIC6.65□□□□□ -1.34
USH2AO75445 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
USH2AO75445 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC6.65□□□□□ -1.34
USH2AO75445 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC6.65□□□□□ -1.34
USH2AO75445 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
USH2AO75445 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC6.65□□□□□ -1.34
USH2AO75445 HELLS-212ENST00000630929 400 ntTSL 5 BASIC6.65□□□□□ -1.34
USH2AO75445 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
USH2AO75445 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
USH2AO75445 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC6.65□□□□□ -1.35
USH2AO75445 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
USH2AO75445 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC6.65□□□□□ -1.35
USH2AO75445 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC6.65□□□□□ -1.35
USH2AO75445 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
USH2AO75445 RNVU1-8-201ENST00000364272 125 ntBASIC6.65□□□□□ -1.35
USH2AO75445 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 RN7SL81P-201ENST00000493781 261 ntBASIC6.65□□□□□ -1.35
USH2AO75445 BCRP4-201ENST00000506079 804 ntBASIC6.65□□□□□ -1.35
USH2AO75445 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC6.65□□□□□ -1.35
USH2AO75445 AC133540.1-201ENST00000620845 1019 ntBASIC6.65□□□□□ -1.35
USH2AO75445 MIR6746-201ENST00000620971 63 ntBASIC6.65□□□□□ -1.35
USH2AO75445 AC020904.3-201ENST00000624199 442 ntBASIC6.65□□□□□ -1.35
USH2AO75445 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USH2AO75445 AC022211.2-201ENST00000585075 2527 ntBASIC6.65□□□□□ -1.35
USH2AO75445 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 AL121949.1-201ENST00000402043 968 ntBASIC6.64□□□□□ -1.35
USH2AO75445 CELP-201ENST00000411440 1249 ntTSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 AC027612.2-202ENST00000445955 1199 ntBASIC6.64□□□□□ -1.35
USH2AO75445 AC022121.1-201ENST00000484584 579 ntBASIC6.64□□□□□ -1.35
USH2AO75445 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC6.64□□□□□ -1.35
USH2AO75445 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC6.64□□□□□ -1.35
USH2AO75445 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 LINC00554-201ENST00000564841 3011 ntBASIC6.64□□□□□ -1.35
USH2AO75445 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms