Protein–RNA interactions for Protein: O15068

MCF2L, Guanine nucleotide exchange factor DBS, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2LO15068 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MCF2LO15068 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MCF2LO15068 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MCF2LO15068 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
MCF2LO15068 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
MCF2LO15068 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MCF2LO15068 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.12■□□□□ 0.17
MCF2LO15068 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
MCF2LO15068 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.12■□□□□ 0.17
MCF2LO15068 MEP1AP4-201ENST00000423244 1087 ntBASIC16.12■□□□□ 0.17
MCF2LO15068 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.12■□□□□ 0.17
MCF2LO15068 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.12■□□□□ 0.17
MCF2LO15068 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.12■□□□□ 0.17
MCF2LO15068 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.12■□□□□ 0.17
MCF2LO15068 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.12■□□□□ 0.17
MCF2LO15068 AC012645.4-201ENST00000610691 1061 ntBASIC16.12■□□□□ 0.17
MCF2LO15068 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
MCF2LO15068 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.12■□□□□ 0.17
MCF2LO15068 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.12■□□□□ 0.17
MCF2LO15068 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MCF2LO15068 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.12■□□□□ 0.17
MCF2LO15068 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.12■□□□□ 0.17
MCF2LO15068 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.12■□□□□ 0.17
MCF2LO15068 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MCF2LO15068 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MCF2LO15068 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MCF2LO15068 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MCF2LO15068 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.12■□□□□ 0.17
MCF2LO15068 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.11■□□□□ 0.17
MCF2LO15068 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.11■□□□□ 0.17
MCF2LO15068 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MCF2LO15068 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.11■□□□□ 0.17
MCF2LO15068 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.11■□□□□ 0.17
MCF2LO15068 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
MCF2LO15068 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.11■□□□□ 0.17
MCF2LO15068 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.11■□□□□ 0.17
MCF2LO15068 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.11■□□□□ 0.17
MCF2LO15068 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.11■□□□□ 0.17
MCF2LO15068 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.11■□□□□ 0.17
MCF2LO15068 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.11■□□□□ 0.17
MCF2LO15068 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.11■□□□□ 0.17
MCF2LO15068 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.11■□□□□ 0.17
MCF2LO15068 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.11■□□□□ 0.17
MCF2LO15068 TIMM17BP1-201ENST00000545713 516 ntBASIC16.11■□□□□ 0.17
MCF2LO15068 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
MCF2LO15068 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.11■□□□□ 0.17
MCF2LO15068 AC140912.1-201ENST00000577171 1054 ntBASIC16.11■□□□□ 0.17
MCF2LO15068 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.11■□□□□ 0.17
MCF2LO15068 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.11■□□□□ 0.17
MCF2LO15068 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.11■□□□□ 0.17
MCF2LO15068 LINC01101-201ENST00000622953 1884 ntBASIC16.11■□□□□ 0.17
MCF2LO15068 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MCF2LO15068 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
MCF2LO15068 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.11■□□□□ 0.17
MCF2LO15068 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.11■□□□□ 0.17
MCF2LO15068 SLC7A15P-201ENST00000424028 1363 ntBASIC16.11■□□□□ 0.17
MCF2LO15068 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MCF2LO15068 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms