Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 AL354989.2-201ENST00000435838 1540 ntBASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 AC006001.1-201ENST00000325130 474 ntBASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 DUX4L45-201ENST00000566406 1057 ntBASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 MIR6869-201ENST00000619434 62 ntBASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTDP1Q9Y5B0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AL645937.2-201ENST00000396808 931 ntBASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AL590640.2-201ENST00000457038 527 ntBASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AC007787.1-201ENST00000588095 1583 ntBASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AL138709.1-201ENST00000614840 1693 ntBASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AC022188.1-201ENST00000620960 1664 ntBASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.73■□□□□ 0.43
CTDP1Q9Y5B0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms