Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 TARDBPP1-201ENST00000442013 1203 ntBASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 AC025678.2-201ENST00000562061 970 ntBASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 MIR6069-201ENST00000620069 79 ntBASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 AC007686.3-201ENST00000619017 3487 ntBASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RHBDD3Q9Y3P4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 SERBP1P3-201ENST00000459980 809 ntBASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 SPDYE12P-201ENST00000618416 771 ntBASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 AL033527.5-202ENST00000641632 1098 ntBASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RHBDD3Q9Y3P4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms