Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.09□□□□□ -0.31
UBQLN2Q9UHD9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UBQLN2Q9UHD9 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
UBQLN2Q9UHD9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.08□□□□□ -0.31
UBQLN2Q9UHD9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
UBQLN2Q9UHD9 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
UBQLN2Q9UHD9 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
UBQLN2Q9UHD9 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
UBQLN2Q9UHD9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 AL355877.3-201ENST00000622820 899 ntBASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 TP73-AS1-207ENST00000624167 988 ntBASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
UBQLN2Q9UHD9 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 AC131902.2-201ENST00000566892 2172 ntBASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 RBM17P3-201ENST00000417687 1192 ntBASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 FAM197Y8-203ENST00000450145 560 ntBASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 FGFR3P6-201ENST00000457012 610 ntBASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 AC106795.1-205ENST00000512851 1056 ntBASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 AC020765.3-201ENST00000613051 740 ntBASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms