Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 AC022447.5-201ENST00000504817 392 ntBASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 AC087072.1-201ENST00000603727 421 ntBASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RIMBP3Q9UFD9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
RIMBP3Q9UFD9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
RIMBP3Q9UFD9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RIMBP3Q9UFD9 AC003102.2-201ENST00000589195 1469 ntBASIC23.39■■□□□ 1.34
RIMBP3Q9UFD9 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC23.39■■□□□ 1.34
RIMBP3Q9UFD9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 ASS1P2-201ENST00000439895 1223 ntBASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 AL773545.2-201ENST00000442149 472 ntBASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 AC095040.1-201ENST00000513286 675 ntBASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 AP003040.1-201ENST00000532044 1024 ntBASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 AC139713.2-207ENST00000641556 1292 ntBASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RIMBP3Q9UFD9 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 VENTXP3-201ENST00000546480 773 ntBASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 AC005274.1-201ENST00000623460 802 ntBASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 Z82244.2-201ENST00000632196 448 ntBASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 PP12613-201ENST00000424958 2230 ntBASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC23.38■■□□□ 1.33
RIMBP3Q9UFD9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 MIR4746-201ENST00000579802 71 ntBASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 AC007292.2-201ENST00000593524 1812 ntBASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 AC022080.1-201ENST00000366255 781 ntBASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 OR8T1P-201ENST00000421347 918 ntBASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 AL954722.1-201ENST00000431238 259 ntBASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 CDKN2A-AS1-201ENST00000441769 823 ntBASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 RN7SL128P-201ENST00000467883 305 ntBASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 AC147876.1-201ENST00000504408 322 ntBASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC23.37■■□□□ 1.33
RIMBP3Q9UFD9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 ZBED1P1-201ENST00000502364 1930 ntBASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 AL137244.1-201ENST00000422931 865 ntBASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 AC004923.3-201ENST00000527532 355 ntBASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC23.36■■□□□ 1.33
RIMBP3Q9UFD9 MSANTD2P1-201ENST00000445341 1368 ntBASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 AC106886.4-201ENST00000623557 2502 ntBASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms