Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CTSFQ9UBX1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CTSFQ9UBX1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSFQ9UBX1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSFQ9UBX1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSFQ9UBX1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CTSFQ9UBX1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSFQ9UBX1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CTSFQ9UBX1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSFQ9UBX1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSFQ9UBX1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CTSFQ9UBX1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSFQ9UBX1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 AC099336.1-201ENST00000417053 1171 ntBASIC14.46□□□□□ -0.09
CTSFQ9UBX1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 C2orf27AP3-201ENST00000434123 579 ntBASIC14.46□□□□□ -0.09
CTSFQ9UBX1 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 AC004066.1-201ENST00000502488 802 ntBASIC14.46□□□□□ -0.09
CTSFQ9UBX1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 AP000812.2-201ENST00000538934 718 ntBASIC14.46□□□□□ -0.09
CTSFQ9UBX1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 AC145423.3-201ENST00000615987 467 ntBASIC14.46□□□□□ -0.09
CTSFQ9UBX1 AL354718.3-201ENST00000616414 581 ntBASIC14.46□□□□□ -0.09
CTSFQ9UBX1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 CR382287.1-201ENST00000623954 586 ntBASIC14.46□□□□□ -0.09
CTSFQ9UBX1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CTSFQ9UBX1 AC007787.1-201ENST00000588095 1583 ntBASIC14.46□□□□□ -0.09
CTSFQ9UBX1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CTSFQ9UBX1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTSFQ9UBX1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTSFQ9UBX1 FLJ16779-201ENST00000612722 7638 ntBASIC14.46□□□□□ -0.1
CTSFQ9UBX1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.46□□□□□ -0.1
CTSFQ9UBX1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CTSFQ9UBX1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTSFQ9UBX1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTSFQ9UBX1 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
CTSFQ9UBX1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
CTSFQ9UBX1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CTSFQ9UBX1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTSFQ9UBX1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
CTSFQ9UBX1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 AL158070.2-201ENST00000623713 1621 ntBASIC14.45□□□□□ -0.1
CTSFQ9UBX1 AC148477.4-201ENST00000613430 1793 ntBASIC14.45□□□□□ -0.1
CTSFQ9UBX1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 AC105917.1-201ENST00000506637 2539 ntBASIC14.45□□□□□ -0.1
CTSFQ9UBX1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 RPL5P21-201ENST00000404620 815 ntBASIC14.45□□□□□ -0.1
CTSFQ9UBX1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms