Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 AC079178.1-201ENST00000420915 656 ntBASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 CALR4P-201ENST00000431943 946 ntBASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 CHMP1AP1-201ENST00000445563 662 ntBASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 AC005730.2-201ENST00000564549 1184 ntBASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 AL451050.2-201ENST00000606967 682 ntBASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 AC084346.2-201ENST00000607097 949 ntBASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 AC244157.2-201ENST00000616239 1006 ntBASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FBXO28Q9NVF7 AL137783.1-201ENST00000623494 1896 ntBASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 GHSR-202ENST00000427970 912 ntBASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 FNTAP2-201ENST00000430308 634 ntBASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 AKR7A2P1-201ENST00000460134 915 ntBASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 HIST2H2BC-201ENST00000498492 580 ntBASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 MESTP3-201ENST00000503460 968 ntBASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 AC100850.1-201ENST00000506768 649 ntBASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 ZACNP1-201ENST00000612259 710 ntBASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 AP001002.3-201ENST00000623482 206 ntBASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FBXO28Q9NVF7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FBXO28Q9NVF7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FBXO28Q9NVF7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FBXO28Q9NVF7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.52■□□□□ 0.39
FBXO28Q9NVF7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
FBXO28Q9NVF7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FBXO28Q9NVF7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.52■□□□□ 0.39
FBXO28Q9NVF7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FBXO28Q9NVF7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
FBXO28Q9NVF7 PAUPAR-201ENST00000630360 2965 ntBASIC17.52■□□□□ 0.39
FBXO28Q9NVF7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 POM121L10P-201ENST00000436994 1285 ntBASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 FTLP10-202ENST00000505798 471 ntBASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 MIR4683-201ENST00000579659 81 ntBASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 AL021578.1-201ENST00000613646 709 ntBASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 INE2-201ENST00000630399 1874 ntBASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 AC068587.10-201ENST00000641210 219 ntBASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FBXO28Q9NVF7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FBXO28Q9NVF7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms