Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 GPAA1P2-201ENST00000417923 928 ntBASIC18.35■□□□□ 0.53
SALL1Q9NSC2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 MESTP3-201ENST00000503460 968 ntBASIC18.35■□□□□ 0.53
SALL1Q9NSC2 COX5BP1-201ENST00000507622 393 ntBASIC18.35■□□□□ 0.53
SALL1Q9NSC2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 REXO1L5P-201ENST00000622260 2098 ntBASIC18.35■□□□□ 0.53
SALL1Q9NSC2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SALL1Q9NSC2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 CLUHP2-201ENST00000426660 1303 ntBASIC18.34■□□□□ 0.53
SALL1Q9NSC2 AL133338.1-201ENST00000565695 1517 ntBASIC18.34■□□□□ 0.53
SALL1Q9NSC2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 HSPB1P2-201ENST00000448722 546 ntBASIC18.34■□□□□ 0.53
SALL1Q9NSC2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 AC099548.2-209ENST00000480264 625 ntBASIC18.34■□□□□ 0.53
SALL1Q9NSC2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 AC004466.1-201ENST00000599515 1080 ntBASIC18.34■□□□□ 0.53
SALL1Q9NSC2 AC243960.2-201ENST00000600996 747 ntBASIC18.34■□□□□ 0.53
SALL1Q9NSC2 ZACNP1-201ENST00000612259 710 ntBASIC18.34■□□□□ 0.53
SALL1Q9NSC2 AC138466.3-201ENST00000619983 221 ntBASIC18.34■□□□□ 0.53
SALL1Q9NSC2 AL008638.5-201ENST00000623814 1298 ntBASIC18.34■□□□□ 0.53
SALL1Q9NSC2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.34■□□□□ 0.53
SALL1Q9NSC2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 AC006058.4-201ENST00000624016 1670 ntBASIC18.33■□□□□ 0.53
SALL1Q9NSC2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 MST1L-201ENST00000442552 2185 ntBASIC18.33■□□□□ 0.53
SALL1Q9NSC2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 CICP11-201ENST00000434745 2827 ntBASIC18.33■□□□□ 0.53
SALL1Q9NSC2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 MIR663B-201ENST00000408361 115 ntBASIC18.33■□□□□ 0.53
SALL1Q9NSC2 AC079178.1-201ENST00000420915 656 ntBASIC18.33■□□□□ 0.53
SALL1Q9NSC2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 AL391280.1-201ENST00000506969 1062 ntBASIC18.33■□□□□ 0.53
SALL1Q9NSC2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
SALL1Q9NSC2 OR10B1P-201ENST00000601666 907 ntBASIC18.33■□□□□ 0.53
SALL1Q9NSC2 AL118558.3-201ENST00000607414 1079 ntBASIC18.33■□□□□ 0.53
SALL1Q9NSC2 AL096828.3-201ENST00000615354 462 ntBASIC18.33■□□□□ 0.53
SALL1Q9NSC2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.33■□□□□ 0.52
SALL1Q9NSC2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SALL1Q9NSC2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SALL1Q9NSC2 TNRC18P2-201ENST00000417666 2714 ntBASIC18.33■□□□□ 0.52
SALL1Q9NSC2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.33■□□□□ 0.52
SALL1Q9NSC2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SALL1Q9NSC2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SALL1Q9NSC2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms