Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.19■□□□□ 0.18
TLR9Q9NR96 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 KRT8P29-201ENST00000420409 1371 ntBASIC16.19■□□□□ 0.18
TLR9Q9NR96 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 AC022217.1-201ENST00000521069 738 ntBASIC16.19■□□□□ 0.18
TLR9Q9NR96 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 RN7SL774P-201ENST00000577467 290 ntBASIC16.19■□□□□ 0.18
TLR9Q9NR96 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 AL645728.2-202ENST00000641679 227 ntBASIC16.19■□□□□ 0.18
TLR9Q9NR96 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.19■□□□□ 0.18
TLR9Q9NR96 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR9Q9NR96 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 MTHFR-217ENST00000641820 1569 ntBASIC16.18■□□□□ 0.18
TLR9Q9NR96 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 AC091046.1-201ENST00000331871 207 ntBASIC16.18■□□□□ 0.18
TLR9Q9NR96 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 AC011742.3-201ENST00000439053 820 ntBASIC16.18■□□□□ 0.18
TLR9Q9NR96 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 FGFR3P5-201ENST00000564496 886 ntBASIC16.18■□□□□ 0.18
TLR9Q9NR96 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 AL645939.5-201ENST00000606834 243 ntBASIC16.18■□□□□ 0.18
TLR9Q9NR96 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 AL513477.1-201ENST00000602865 2407 ntBASIC16.18■□□□□ 0.18
TLR9Q9NR96 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TLR9Q9NR96 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR9Q9NR96 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TLR9Q9NR96 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms