Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 REXO1L2P-201ENST00000425429 2069 ntBASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 FO393414.2-201ENST00000405153 598 ntBASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 GHSR-202ENST00000427970 912 ntBASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 ADH5P3-201ENST00000433842 1137 ntBASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 TIMM8BP1-201ENST00000452384 211 ntBASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 RARRES2P9-201ENST00000565168 469 ntBASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 AC055717.3-201ENST00000622967 595 ntBASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 AC092902.6-201ENST00000641783 218 ntBASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 AC140479.7-201ENST00000636301 2332 ntBASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 KRT8P48-201ENST00000515599 1220 ntBASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 LINC01225-203ENST00000563550 1244 ntBASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 AC139749.1-202ENST00000617529 3139 ntBASIC13.64□□□□□ -0.23
COMMD4Q9H0A8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms