Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABARAPL3Q9BY60 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14□□□□□ -0.17
GABARAPL3Q9BY60 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
GABARAPL3Q9BY60 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
GABARAPL3Q9BY60 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GABARAPL3Q9BY60 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14□□□□□ -0.17
GABARAPL3Q9BY60 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABARAPL3Q9BY60 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABARAPL3Q9BY60 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
GABARAPL3Q9BY60 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 MRPL3P1-201ENST00000400109 1033 ntBASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 AC074338.1-201ENST00000416825 156 ntBASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 FAAHP1-202ENST00000446499 1238 ntBASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 AC022447.6-201ENST00000515522 438 ntBASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.99□□□□□ -0.17
GABARAPL3Q9BY60 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 AC079140.1-201ENST00000508039 487 ntBASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 IGHV3-62-201ENST00000520057 340 ntBASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 AC092902.6-201ENST00000641783 218 ntBASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 AC092865.6-201ENST00000642101 219 ntBASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.98□□□□□ -0.17
GABARAPL3Q9BY60 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms