Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 ANKRD19P-201ENST00000338192 862 ntBASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 CNN2P8-201ENST00000421872 913 ntBASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 AC119751.2-201ENST00000504529 210 ntBASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 IGHV3-71-201ENST00000523324 359 ntBASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 SNX29P1-201ENST00000548357 1007 ntBASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 LRRC59-203ENST00000576448 1531 ntBASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 RN7SL48P-201ENST00000579283 293 ntBASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 AC244669.2-201ENST00000612320 853 ntBASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ECHDC3Q96DC8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 C2orf27AP3-201ENST00000434123 579 ntBASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 RPL7P3-201ENST00000441388 714 ntBASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 AC017083.2-201ENST00000608069 979 ntBASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 AL354718.3-201ENST00000616414 581 ntBASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 CR382287.1-201ENST00000623954 586 ntBASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 REXO1L2P-201ENST00000425429 2069 ntBASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms