Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.95□□□□□ -0.34
GCN1Q92616 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.95□□□□□ -0.34
GCN1Q92616 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC12.95□□□□□ -0.34
GCN1Q92616 LINC01144-201ENST00000626198 1710 ntBASIC12.95□□□□□ -0.34
GCN1Q92616 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.95□□□□□ -0.34
GCN1Q92616 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.95□□□□□ -0.34
GCN1Q92616 AC006058.4-201ENST00000624016 1670 ntBASIC12.95□□□□□ -0.34
GCN1Q92616 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.95□□□□□ -0.34
GCN1Q92616 AC018470.1-201ENST00000624790 3129 ntBASIC12.95□□□□□ -0.34
GCN1Q92616 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
GCN1Q92616 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC12.95□□□□□ -0.34
GCN1Q92616 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
GCN1Q92616 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC12.95□□□□□ -0.34
GCN1Q92616 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC12.95□□□□□ -0.34
GCN1Q92616 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC12.95□□□□□ -0.34
GCN1Q92616 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC12.95□□□□□ -0.34
GCN1Q92616 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC12.95□□□□□ -0.34
GCN1Q92616 MIR4459-201ENST00000581837 66 ntBASIC12.95□□□□□ -0.34
GCN1Q92616 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
GCN1Q92616 CD276-203ENST00000537340 2439 ntTSL 2 BASIC12.95□□□□□ -0.34
GCN1Q92616 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.95□□□□□ -0.34
GCN1Q92616 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GCN1Q92616 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
GCN1Q92616 AL157407.1-201ENST00000435784 904 ntBASIC12.95□□□□□ -0.34
GCN1Q92616 CDKN2A-AS1-201ENST00000441769 823 ntBASIC12.95□□□□□ -0.34
GCN1Q92616 RNA5SP406-201ENST00000516106 112 ntBASIC12.95□□□□□ -0.34
GCN1Q92616 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC12.95□□□□□ -0.34
GCN1Q92616 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.95□□□□□ -0.34
GCN1Q92616 MIR7848-201ENST00000617402 101 ntBASIC12.95□□□□□ -0.34
GCN1Q92616 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
GCN1Q92616 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
GCN1Q92616 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.94□□□□□ -0.34
GCN1Q92616 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.94□□□□□ -0.34
GCN1Q92616 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
GCN1Q92616 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
GCN1Q92616 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
GCN1Q92616 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.94□□□□□ -0.34
GCN1Q92616 PPP1R2P10-201ENST00000393023 595 ntBASIC12.94□□□□□ -0.34
GCN1Q92616 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC12.94□□□□□ -0.34
GCN1Q92616 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.94□□□□□ -0.34
GCN1Q92616 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC12.94□□□□□ -0.34
GCN1Q92616 RN7SL523P-201ENST00000484401 298 ntBASIC12.94□□□□□ -0.34
GCN1Q92616 KRT18P37-201ENST00000520711 1282 ntBASIC12.94□□□□□ -0.34
GCN1Q92616 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.94□□□□□ -0.34
GCN1Q92616 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
GCN1Q92616 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
GCN1Q92616 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
GCN1Q92616 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
GCN1Q92616 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.94□□□□□ -0.34
GCN1Q92616 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC12.94□□□□□ -0.34
GCN1Q92616 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.94□□□□□ -0.34
GCN1Q92616 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
GCN1Q92616 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC12.94□□□□□ -0.34
GCN1Q92616 ANKRD26P1-203ENST00000569528 966 ntBASIC12.94□□□□□ -0.34
GCN1Q92616 MIR5193-201ENST00000584510 109 ntBASIC12.94□□□□□ -0.34
GCN1Q92616 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC12.94□□□□□ -0.34
GCN1Q92616 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GCN1Q92616 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms