Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 AC018665.1-201ENST00000622927 1362 ntBASIC14.58□□□□□ -0.08
TM9SF4Q92544 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 CICP13-201ENST00000422015 2789 ntBASIC14.57□□□□□ -0.08
TM9SF4Q92544 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 AZGP1P1-201ENST00000411909 902 ntBASIC14.57□□□□□ -0.08
TM9SF4Q92544 SOCS2P1-201ENST00000417727 557 ntBASIC14.57□□□□□ -0.08
TM9SF4Q92544 ACTG1P3-201ENST00000431775 1114 ntBASIC14.57□□□□□ -0.08
TM9SF4Q92544 RPL13P2-201ENST00000440687 659 ntBASIC14.57□□□□□ -0.08
TM9SF4Q92544 KLF2P4-201ENST00000451959 1225 ntBASIC14.57□□□□□ -0.08
TM9SF4Q92544 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 AC022494.1-201ENST00000466044 728 ntBASIC14.57□□□□□ -0.08
TM9SF4Q92544 PTP4A1P2-201ENST00000546033 454 ntBASIC14.57□□□□□ -0.08
TM9SF4Q92544 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.57□□□□□ -0.08
TM9SF4Q92544 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TM9SF4Q92544 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 AP001282.1-201ENST00000531301 1499 ntBASIC14.57□□□□□ -0.08
TM9SF4Q92544 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF4Q92544 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF4Q92544 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF4Q92544 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF4Q92544 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF4Q92544 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF4Q92544 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.56□□□□□ -0.08
TM9SF4Q92544 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF4Q92544 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF4Q92544 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TM9SF4Q92544 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF4Q92544 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.56□□□□□ -0.08
TM9SF4Q92544 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF4Q92544 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.56□□□□□ -0.08
TM9SF4Q92544 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
TM9SF4Q92544 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TM9SF4Q92544 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF4Q92544 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms