Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AL162426.1-201ENST00000624141 743 ntBASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 AC002472.3-201ENST00000640124 621 ntBASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 AC100827.2-201ENST00000563214 1194 ntBASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 RN7SL574P-201ENST00000581512 297 ntBASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAPGEF4Q8WZA2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 AC134698.3-201ENST00000523880 214 ntBASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 MIR4706-201ENST00000582134 82 ntBASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 AL805961.1-203ENST00000641078 1258 ntBASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 PRAL-201ENST00000624952 3286 ntBASIC19.91■□□□□ 0.78
RAPGEF4Q8WZA2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAPGEF4Q8WZA2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.9■□□□□ 0.78
RAPGEF4Q8WZA2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.9■□□□□ 0.78
RAPGEF4Q8WZA2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAPGEF4Q8WZA2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.9■□□□□ 0.78
RAPGEF4Q8WZA2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAPGEF4Q8WZA2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAPGEF4Q8WZA2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms