Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCD2Q8WV60 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 NORAD-201ENST00000565493 5339 ntBASIC15.68■□□□□ 0.1
PTCD2Q8WV60 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.68■□□□□ 0.1
PTCD2Q8WV60 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 KRT18P43-201ENST00000469825 1281 ntBASIC15.68■□□□□ 0.1
PTCD2Q8WV60 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCD2Q8WV60 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 LINC01101-201ENST00000622953 1884 ntBASIC15.67■□□□□ 0.1
PTCD2Q8WV60 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 AC138969.3-201ENST00000546612 1459 ntBASIC15.67■□□□□ 0.1
PTCD2Q8WV60 AC138932.2-201ENST00000548268 1459 ntBASIC15.67■□□□□ 0.1
PTCD2Q8WV60 AC126755.4-201ENST00000549796 1459 ntBASIC15.67■□□□□ 0.1
PTCD2Q8WV60 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 ZBED1P1-201ENST00000502364 1930 ntBASIC15.67■□□□□ 0.1
PTCD2Q8WV60 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTCD2Q8WV60 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms