Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 RN7SL67P-201ENST00000492147 296 ntBASIC18.34■□□□□ 0.53
SNED1Q8TER0 SCARNA21-201ENST00000517026 139 ntBASIC18.34■□□□□ 0.53
SNED1Q8TER0 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.34■□□□□ 0.53
SNED1Q8TER0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNED1Q8TER0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.34■□□□□ 0.53
SNED1Q8TER0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNED1Q8TER0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNED1Q8TER0 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNED1Q8TER0 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNED1Q8TER0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNED1Q8TER0 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNED1Q8TER0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 RN7SL258P-201ENST00000478664 300 ntBASIC18.33■□□□□ 0.53
SNED1Q8TER0 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNED1Q8TER0 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 DNM1P30-201ENST00000563586 452 ntBASIC18.33■□□□□ 0.53
SNED1Q8TER0 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNED1Q8TER0 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 AC005962.1-201ENST00000584100 773 ntBASIC18.33■□□□□ 0.53
SNED1Q8TER0 AC007718.1-201ENST00000621078 280 ntBASIC18.33■□□□□ 0.53
SNED1Q8TER0 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNED1Q8TER0 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNED1Q8TER0 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.33■□□□□ 0.53
SNED1Q8TER0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNED1Q8TER0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SNED1Q8TER0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNED1Q8TER0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNED1Q8TER0 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNED1Q8TER0 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNED1Q8TER0 AL365203.3-201ENST00000609742 2057 ntBASIC18.33■□□□□ 0.52
SNED1Q8TER0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNED1Q8TER0 PCDHA1-201ENST00000378133 2726 ntBASIC18.33■□□□□ 0.52
SNED1Q8TER0 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNED1Q8TER0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNED1Q8TER0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNED1Q8TER0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNED1Q8TER0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
SNED1Q8TER0 AC239868.1-201ENST00000369385 493 ntBASIC18.32■□□□□ 0.52
SNED1Q8TER0 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNED1Q8TER0 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNED1Q8TER0 RN7SL8P-201ENST00000461771 266 ntBASIC18.32■□□□□ 0.52
SNED1Q8TER0 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.32■□□□□ 0.52
SNED1Q8TER0 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNED1Q8TER0 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.32■□□□□ 0.52
SNED1Q8TER0 RPL17P45-201ENST00000586289 509 ntBASIC18.32■□□□□ 0.52
SNED1Q8TER0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.32■□□□□ 0.52
SNED1Q8TER0 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.32■□□□□ 0.52
SNED1Q8TER0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNED1Q8TER0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNED1Q8TER0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNED1Q8TER0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNED1Q8TER0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.32■□□□□ 0.52
SNED1Q8TER0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SNED1Q8TER0 AC006058.4-201ENST00000624016 1670 ntBASIC18.32■□□□□ 0.52
SNED1Q8TER0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.32■□□□□ 0.52
SNED1Q8TER0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNED1Q8TER0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.32■□□□□ 0.52
SNED1Q8TER0 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms