Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 RPSAP15-201ENST00000448168 861 ntBASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 AC138701.2-201ENST00000553634 226 ntBASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 AC010976.2-201ENST00000609697 852 ntBASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 AC018695.6-201ENST00000614011 534 ntBASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 RGS5-216ENST00000449680 788 ntTSL 3 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 API5-208ENST00000531273 1868 ntTSL 2 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 AL590440.2-201ENST00000641973 1595 ntBASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 RNA5SP417-201ENST00000516459 108 ntBASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 AC013553.1-201ENST00000560906 267 ntBASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 AC140113.1-201ENST00000603467 169 ntBASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
ALMS1Q8TCU4 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 AC063952.3-201ENST00000467756 308 ntBASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 MIR6720-201ENST00000611664 98 ntBASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms