Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 AC098614.1-201ENST00000368528 745 ntBASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 ELK1P1-201ENST00000485699 580 ntBASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 GAPDHP40-201ENST00000505218 1006 ntBASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 FLJ16779-201ENST00000612722 7638 ntBASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCC2Q8TAQ2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 CTBP2P3-201ENST00000585629 1255 ntBASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 AC012508.2-201ENST00000567613 1472 ntBASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 PKD1P5-201ENST00000532415 10291 ntBASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCC2Q8TAQ2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 COX5BP8-201ENST00000416911 349 ntBASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 NME2P1-201ENST00000426182 414 ntBASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 FAM86LP-201ENST00000478302 853 ntBASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 AC239800.4-201ENST00000603712 296 ntBASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 CU639417.3-201ENST00000624240 1404 ntBASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 AC063926.2-201ENST00000623766 1308 ntBASIC17.97■□□□□ 0.47
SMARCC2Q8TAQ2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCC2Q8TAQ2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms