Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 KRT8P22-201ENST00000562317 1415 ntBASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 LINC02228-204ENST00000642115 2962 ntBASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 AC023157.3-201ENST00000619086 2088 ntBASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 DGCR5-201ENST00000399539 862 ntBASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 AL162726.2-201ENST00000438986 1017 ntBASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 WFDC1-204ENST00000613603 549 ntBASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC148Q8NFR7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 MROH4P-201ENST00000431302 1578 ntBASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 AC098614.1-201ENST00000368528 745 ntBASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 AP006294.1-201ENST00000415407 339 ntBASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 AC025048.6-201ENST00000634326 1161 ntBASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 AL358472.5-202ENST00000641448 1267 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms