Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 AC006058.4-201ENST00000624016 1670 ntBASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 REXO1L4P-201ENST00000605109 1937 ntBASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 AC104457.1-201ENST00000401024 814 ntBASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 AC134915.1-201ENST00000426461 574 ntBASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 AL442647.2-201ENST00000429864 857 ntBASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 MYCLP2-201ENST00000449268 967 ntBASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 API5-211ENST00000534695 560 ntTSL 5 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 CHCHD2P3-201ENST00000603038 451 ntBASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
ATPAF2Q8N5M1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
ATPAF2Q8N5M1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 AGAP7P-201ENST00000582299 2062 ntBASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 AGAP14-201ENST00000624701 2060 ntBASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 AC098850.1-201ENST00000419919 790 ntBASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 AC092552.1-201ENST00000547243 906 ntBASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 AC120045.2-201ENST00000567334 178 ntBASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 AC008494.3-201ENST00000606615 944 ntBASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.76■□□□□ 0.11
ATPAF2Q8N5M1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms