Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 MIR326-201ENST00000362220 95 ntBASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 GOLGA2P4-201ENST00000441462 777 ntBASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 AC022494.1-201ENST00000466044 728 ntBASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 AC026434.2-201ENST00000506094 1078 ntBASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 AP003171.2-201ENST00000528208 925 ntBASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 C2orf69P2-201ENST00000562032 1123 ntBASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 AP006547.1-201ENST00000563435 692 ntBASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 AL137783.1-201ENST00000623494 1896 ntBASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBE3BQ7Z3V4 AC023024.2-201ENST00000623561 1993 ntBASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 FAM8A4P-201ENST00000435433 1213 ntBASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 CNN2P10-201ENST00000443067 918 ntBASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 GPR182-203ENST00000622922 591 ntBASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE3BQ7Z3V4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms