Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 AC007191.1-201ENST00000623179 2995 ntBASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NHLRC1Q6VVB1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 CICP23-201ENST00000605013 2741 ntBASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 BASP1P1-201ENST00000430708 665 ntBASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 UGT1A2P-201ENST00000454886 866 ntBASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 AC025181.2-201ENST00000606994 802 ntBASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 AL158212.4-201ENST00000624062 1286 ntBASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 MROH4P-201ENST00000431302 1578 ntBASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 AC007686.3-201ENST00000619017 3487 ntBASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 AC091951.1-201ENST00000512854 2465 ntBASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NHLRC1Q6VVB1 AL365209.1-201ENST00000624418 6473 ntBASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 AC023024.2-201ENST00000623561 1993 ntBASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms