Protein–RNA interactions for Protein: Q6UXM1

LRIG3, Leucine-rich repeats and immunoglobulin-like domains protein 3, humanhuman

Predictions only

Length 1,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3Q6UXM1 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 AC026979.3-201ENST00000607315 403 ntBASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 AC148477.8-201ENST00000624298 468 ntBASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRIG3Q6UXM1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 AC015818.8-201ENST00000587907 1519 ntBASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 CICP8-201ENST00000455800 2813 ntBASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 AC105206.1-202ENST00000314927 2368 ntBASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 AC016397.2-201ENST00000624848 1985 ntBASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 AC092910.1-201ENST00000482027 1129 ntBASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 AC093909.1-201ENST00000504731 1122 ntBASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 DGCR9-201ENST00000609630 2415 ntBASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRIG3Q6UXM1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms