Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NIPAL1Q6NVV3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL1Q6NVV3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.92□□□□□ -0.02
NIPAL1Q6NVV3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.92□□□□□ -0.02
NIPAL1Q6NVV3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL1Q6NVV3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL1Q6NVV3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL1Q6NVV3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.92□□□□□ -0.02
NIPAL1Q6NVV3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 PIN1P1-201ENST00000412108 996 ntBASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 SPTLC1P1-201ENST00000447199 261 ntBASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 AC055876.2-201ENST00000531834 546 ntBASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 TPRX2P-201ENST00000535362 881 ntBASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 RARRES2P5-201ENST00000564013 466 ntBASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 AC104794.3-201ENST00000566840 1248 ntBASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
NIPAL1Q6NVV3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 AC007686.3-201ENST00000619017 3487 ntBASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 AC074338.1-201ENST00000416825 156 ntBASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 AL353779.1-201ENST00000434793 351 ntBASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 AC002472.2-201ENST00000442739 958 ntBASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 AC036164.1-201ENST00000570544 333 ntBASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 MIR3197-201ENST00000582241 73 ntBASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 AC018892.3-201ENST00000623986 2499 ntBASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms