Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 CICP24-201ENST00000605464 2705 ntBASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TTC39BQ5VTQ0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 AC127383.1-201ENST00000444697 1800 ntBASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 AC134915.1-201ENST00000426461 574 ntBASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 AL162726.2-201ENST00000438986 1017 ntBASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 AC133539.2-201ENST00000604757 467 ntBASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 AC009090.5-201ENST00000624886 2285 ntBASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC39BQ5VTQ0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 AC091951.1-201ENST00000512854 2465 ntBASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 AC063926.2-201ENST00000623766 1308 ntBASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 SOCS2P1-201ENST00000417727 557 ntBASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 KRT17P7-201ENST00000451704 1104 ntBASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 WFDC1-204ENST00000613603 549 ntBASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC39BQ5VTQ0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms