Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARS2Q5ST30 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARS2Q5ST30 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARS2Q5ST30 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARS2Q5ST30 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 PFN1P12-201ENST00000455938 534 ntBASIC16.26■□□□□ 0.19
VARS2Q5ST30 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 MIR4741-201ENST00000579822 90 ntBASIC16.26■□□□□ 0.19
VARS2Q5ST30 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 ACTG1P22-201ENST00000603793 1099 ntBASIC16.26■□□□□ 0.19
VARS2Q5ST30 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.26■□□□□ 0.19
VARS2Q5ST30 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARS2Q5ST30 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARS2Q5ST30 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARS2Q5ST30 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VARS2Q5ST30 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 AL354989.2-201ENST00000435838 1540 ntBASIC16.25■□□□□ 0.19
VARS2Q5ST30 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 MIR326-201ENST00000362220 95 ntBASIC16.25■□□□□ 0.19
VARS2Q5ST30 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 AC104457.1-201ENST00000401024 814 ntBASIC16.25■□□□□ 0.19
VARS2Q5ST30 YY1P1-201ENST00000427625 668 ntBASIC16.25■□□□□ 0.19
VARS2Q5ST30 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 AC091271.1-201ENST00000611877 1162 ntBASIC16.25■□□□□ 0.19
VARS2Q5ST30 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.25■□□□□ 0.19
VARS2Q5ST30 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARS2Q5ST30 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 AC090616.6-203ENST00000579186 1945 ntBASIC16.24■□□□□ 0.19
VARS2Q5ST30 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 SDR42E1P3-201ENST00000438345 502 ntBASIC16.24■□□□□ 0.19
VARS2Q5ST30 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 AC022616.1-201ENST00000518688 554 ntBASIC16.24■□□□□ 0.19
VARS2Q5ST30 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 AC009118.3-201ENST00000622896 873 ntBASIC16.24■□□□□ 0.19
VARS2Q5ST30 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 AL596257.1-201ENST00000641463 2694 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms