Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 AC126335.2-201ENST00000623362 4637 ntBASIC13.85□□□□□ -0.19
CCDC58Q4VC31 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.85□□□□□ -0.19
CCDC58Q4VC31 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 HNRNPUP1-201ENST00000554987 333 ntBASIC13.84□□□□□ -0.19
CCDC58Q4VC31 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 AP002472.1-201ENST00000577490 586 ntBASIC13.84□□□□□ -0.19
CCDC58Q4VC31 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 Z83851.2-201ENST00000609564 659 ntBASIC13.84□□□□□ -0.19
CCDC58Q4VC31 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC58Q4VC31 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CCDC58Q4VC31 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CCDC58Q4VC31 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.19
CCDC58Q4VC31 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCDC58Q4VC31 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCDC58Q4VC31 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
CCDC58Q4VC31 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCDC58Q4VC31 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms